Simple ClamAV Usage

Source: Nice Resource
http://askubuntu.com/questions/250290/how-do-i-scan-for-viruses-with-clamav

Install:
sudo apt-get install clamav

Refresh virus definition database:
sudo freshclam

Scan all files on computer showing each
clamscan -r /

Only display infected files and ring bell
clamscan -r --bell -i /

Scan all files and move them to infected dir
clamscan -r --move=/home/USER/VIRUS /home/USER

Scan all files and remove bad ones
clamscan -r --remove /home/USER